Can a player exhaust a rune for no reason (without using the energy) in order to ready it again with Mana Flow and effectively gain an extra rune?
Answered under Unleashed Rules FAQ and Clarifications
No. You cannot arbitrarily exhaust a rune for no reason just to have Mana Flow ready it again and net an extra usable rune. There is no rule that allows players to exhaust runes as a free, discretionary action; actions that change runes or add resources happen only when game effects instruct them to, and Adds (resource gains) are limited and finalize immediately .
A player may not exhaust a rune solely as a voluntary, purposeless action in order to later ready it with an effect and thereby gain an extra resource. Exhausting or readying runes must be performed by game effects (cards/abilities) that instruct you to do so; you can't take a free exhaust action to create a loop that nets resources.


